Two poplar glycosyltransferase genes, PdGATL1.1 and PdGATL1.2, are functional orthologs to PARVUS/AtGATL1 in Arabidopsis.
Identifieur interne : 003447 ( Main/Exploration ); précédent : 003446; suivant : 003448Two poplar glycosyltransferase genes, PdGATL1.1 and PdGATL1.2, are functional orthologs to PARVUS/AtGATL1 in Arabidopsis.
Auteurs : Yingzhen Kong [États-Unis] ; Gongke Zhou ; Utku Avci ; Xiaogang Gu ; Chelsea Jones ; Yanbin Yin ; Ying Xu ; Michael G. HahnSource :
- Molecular plant [ 1674-2052 ] ; 2009.
Descripteurs français
- KwdFr :
- ADN bactérien (MeSH), Arabidopsis (enzymologie), Arabidopsis (génétique), Données de séquences moléculaires (MeSH), Glycosyltransferase (classification), Glycosyltransferase (composition chimique), Glycosyltransferase (génétique), Glycosyltransferase (métabolisme), Phylogenèse (MeSH), Populus (enzymologie), Populus (génétique), Protéines d'Arabidopsis (classification), Protéines d'Arabidopsis (composition chimique), Protéines d'Arabidopsis (génétique), Protéines d'Arabidopsis (métabolisme), Protéines de transport membranaire (classification), Protéines de transport membranaire (composition chimique), Protéines de transport membranaire (génétique), Protéines de transport membranaire (métabolisme), Protéines végétales (classification), Protéines végétales (composition chimique), Protéines végétales (génétique), Protéines végétales (métabolisme), Réaction de polymérisation en chaîne (MeSH), Similitude de séquences d'acides aminés (MeSH), Séquence d'acides aminés (MeSH), Test de complémentation (MeSH), Végétaux génétiquement modifiés (enzymologie), Végétaux génétiquement modifiés (génétique), Xylanes (génétique), Xylanes (métabolisme).
- MESH :
- classification : Glycosyltransferase, Protéines d'Arabidopsis, Protéines de transport membranaire, Protéines végétales.
- composition chimique : Glycosyltransferase, Protéines d'Arabidopsis, Protéines de transport membranaire, Protéines végétales.
- enzymologie : Arabidopsis, Populus, Végétaux génétiquement modifiés.
- génétique : Arabidopsis, Glycosyltransferase, Populus, Protéines d'Arabidopsis, Protéines de transport membranaire, Protéines végétales, Végétaux génétiquement modifiés, Xylanes.
- métabolisme : Glycosyltransferase, Protéines d'Arabidopsis, Protéines de transport membranaire, Protéines végétales, Xylanes.
- ADN bactérien, Données de séquences moléculaires, Phylogenèse, Réaction de polymérisation en chaîne, Similitude de séquences d'acides aminés, Séquence d'acides aminés, Test de complémentation.
English descriptors
- KwdEn :
- Amino Acid Sequence (MeSH), Arabidopsis (enzymology), Arabidopsis (genetics), Arabidopsis Proteins (chemistry), Arabidopsis Proteins (classification), Arabidopsis Proteins (genetics), Arabidopsis Proteins (metabolism), DNA, Bacterial (MeSH), Genetic Complementation Test (MeSH), Glycosyltransferases (chemistry), Glycosyltransferases (classification), Glycosyltransferases (genetics), Glycosyltransferases (metabolism), Membrane Transport Proteins (chemistry), Membrane Transport Proteins (classification), Membrane Transport Proteins (genetics), Membrane Transport Proteins (metabolism), Molecular Sequence Data (MeSH), Phylogeny (MeSH), Plant Proteins (chemistry), Plant Proteins (classification), Plant Proteins (genetics), Plant Proteins (metabolism), Plants, Genetically Modified (enzymology), Plants, Genetically Modified (genetics), Polymerase Chain Reaction (MeSH), Populus (enzymology), Populus (genetics), Sequence Homology, Amino Acid (MeSH), Xylans (genetics), Xylans (metabolism).
- MESH :
- chemical , chemistry : Arabidopsis Proteins, Glycosyltransferases, Membrane Transport Proteins, Plant Proteins.
- chemical , classification : Arabidopsis Proteins, Glycosyltransferases, Membrane Transport Proteins, Plant Proteins.
- enzymology : Arabidopsis, Plants, Genetically Modified, Populus.
- genetics : Arabidopsis, Arabidopsis Proteins, Glycosyltransferases, Membrane Transport Proteins, Plant Proteins, Plants, Genetically Modified, Populus, Xylans.
- chemical , metabolism : Arabidopsis Proteins, Glycosyltransferases, Membrane Transport Proteins, Plant Proteins, Xylans.
- Amino Acid Sequence, DNA, Bacterial, Genetic Complementation Test, Molecular Sequence Data, Phylogeny, Polymerase Chain Reaction, Sequence Homology, Amino Acid.
Abstract
Several genes in Arabidopsis, including PARVUS/AtGATL1, have been implicated in xylan synthesis. However, the biosynthesis of xylan in woody plants, where this polysaccharide is a major component of wood, is poorly understood. Here, we characterize two Populus genes, PdGATL1.1 and PdGATL1.2, the closest orthologs to the Arabidopsis PARVUS/GATL1 gene, with respect to their gene expression in poplar, their sub-cellular localization, and their ability to complement the parvus mutation in Arabidopsis. Overexpression of the two poplar genes in the parvus mutant rescued most of the defects caused by the parvus mutation, including morphological changes, collapsed xylem, and altered cell wall monosaccharide composition. Quantitative RT-PCR showed that PdGATL1.1 is expressed most strongly in developing xylem of poplar. In contrast, PdGATL1.2 is expressed much more uniformly in leaf, shoot tip, cortex, phloem, and xylem, and the transcript level of PdGATL1.2 is much lower than that of PdGATL1.1 in all tissues examined. Sub-cellular localization experiments showed that these two proteins are localized to both ER and Golgi in comparison with marker proteins resident to these sub-cellular compartments. Our data indicate that PdGATL1.1 and PdGATL1.2 are functional orthologs of PARVUS/GATL1 and can play a role in xylan synthesis, but may also have role(s) in the synthesis of other wall polymers.
DOI: 10.1093/mp/ssp068
PubMed: 19825678
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Hahn</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2009">2009</date><idno type="RBID">pubmed:19825678</idno><idno type="pmid">19825678</idno><idno type="doi">10.1093/mp/ssp068</idno><idno type="wicri:Area/Main/Corpus">003418</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003418</idno><idno type="wicri:Area/Main/Curation">003418</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">003418</idno><idno type="wicri:Area/Main/Exploration">003418</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Two poplar glycosyltransferase genes, PdGATL1.1 and PdGATL1.2, are functional orthologs to PARVUS/AtGATL1 in Arabidopsis.</title><author><name sortKey="Kong, Yingzhen" sort="Kong, Yingzhen" uniqKey="Kong Y" first="Yingzhen" last="Kong">Yingzhen Kong</name><affiliation wicri:level="2"><nlm:affiliation>Complex Carbohydrate Research Center, The University of Georgia, 315 Riverbend Road, Athens, GA 30602, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Complex Carbohydrate Research Center, The University of Georgia, 315 Riverbend Road, Athens, GA 30602</wicri:regionArea><placeName><region type="state">Géorgie (États-Unis)</region></placeName></affiliation></author><author><name sortKey="Zhou, Gongke" sort="Zhou, Gongke" uniqKey="Zhou G" first="Gongke" last="Zhou">Gongke Zhou</name></author><author><name sortKey="Avci, Utku" sort="Avci, Utku" uniqKey="Avci U" first="Utku" last="Avci">Utku Avci</name></author><author><name sortKey="Gu, Xiaogang" sort="Gu, Xiaogang" uniqKey="Gu X" first="Xiaogang" last="Gu">Xiaogang Gu</name></author><author><name sortKey="Jones, Chelsea" sort="Jones, Chelsea" uniqKey="Jones C" first="Chelsea" last="Jones">Chelsea Jones</name></author><author><name sortKey="Yin, Yanbin" sort="Yin, Yanbin" uniqKey="Yin Y" first="Yanbin" last="Yin">Yanbin Yin</name></author><author><name sortKey="Xu, Ying" sort="Xu, Ying" uniqKey="Xu Y" first="Ying" last="Xu">Ying Xu</name></author><author><name sortKey="Hahn, Michael G" sort="Hahn, Michael G" uniqKey="Hahn M" first="Michael G" last="Hahn">Michael G. 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(genetics)</term><term>Membrane Transport Proteins (metabolism)</term><term>Molecular Sequence Data (MeSH)</term><term>Phylogeny (MeSH)</term><term>Plant Proteins (chemistry)</term><term>Plant Proteins (classification)</term><term>Plant Proteins (genetics)</term><term>Plant Proteins (metabolism)</term><term>Plants, Genetically Modified (enzymology)</term><term>Plants, Genetically Modified (genetics)</term><term>Polymerase Chain Reaction (MeSH)</term><term>Populus (enzymology)</term><term>Populus (genetics)</term><term>Sequence Homology, Amino Acid (MeSH)</term><term>Xylans (genetics)</term><term>Xylans (metabolism)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (MeSH)</term><term>Arabidopsis (enzymologie)</term><term>Arabidopsis (génétique)</term><term>Données de séquences moléculaires (MeSH)</term><term>Glycosyltransferase (classification)</term><term>Glycosyltransferase (composition chimique)</term><term>Glycosyltransferase 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moléculaires</term><term>Phylogenèse</term><term>Réaction de polymérisation en chaîne</term><term>Similitude de séquences d'acides aminés</term><term>Séquence d'acides aminés</term><term>Test de complémentation</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Several genes in Arabidopsis, including PARVUS/AtGATL1, have been implicated in xylan synthesis. However, the biosynthesis of xylan in woody plants, where this polysaccharide is a major component of wood, is poorly understood. Here, we characterize two Populus genes, PdGATL1.1 and PdGATL1.2, the closest orthologs to the Arabidopsis PARVUS/GATL1 gene, with respect to their gene expression in poplar, their sub-cellular localization, and their ability to complement the parvus mutation in Arabidopsis. Overexpression of the two poplar genes in the parvus mutant rescued most of the defects caused by the parvus mutation, including morphological changes, collapsed xylem, and altered cell wall monosaccharide composition. Quantitative RT-PCR showed that PdGATL1.1 is expressed most strongly in developing xylem of poplar. In contrast, PdGATL1.2 is expressed much more uniformly in leaf, shoot tip, cortex, phloem, and xylem, and the transcript level of PdGATL1.2 is much lower than that of PdGATL1.1 in all tissues examined. Sub-cellular localization experiments showed that these two proteins are localized to both ER and Golgi in comparison with marker proteins resident to these sub-cellular compartments. Our data indicate that PdGATL1.1 and PdGATL1.2 are functional orthologs of PARVUS/GATL1 and can play a role in xylan synthesis, but may also have role(s) in the synthesis of other wall polymers.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">19825678</PMID><DateCompleted><Year>2010</Year><Month>02</Month><Day>04</Day></DateCompleted><DateRevised><Year>2009</Year><Month>10</Month><Day>14</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">1674-2052</ISSN><JournalIssue CitedMedium="Print"><Volume>2</Volume><Issue>5</Issue><PubDate><Year>2009</Year><Month>Sep</Month></PubDate></JournalIssue><Title>Molecular plant</Title><ISOAbbreviation>Mol Plant</ISOAbbreviation></Journal><ArticleTitle>Two poplar glycosyltransferase genes, PdGATL1.1 and PdGATL1.2, are functional orthologs to PARVUS/AtGATL1 in Arabidopsis.</ArticleTitle><Pagination><MedlinePgn>1040-50</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/mp/ssp068</ELocationID><Abstract><AbstractText>Several genes in Arabidopsis, including PARVUS/AtGATL1, have been implicated in xylan synthesis. However, the biosynthesis of xylan in woody plants, where this polysaccharide is a major component of wood, is poorly understood. Here, we characterize two Populus genes, PdGATL1.1 and PdGATL1.2, the closest orthologs to the Arabidopsis PARVUS/GATL1 gene, with respect to their gene expression in poplar, their sub-cellular localization, and their ability to complement the parvus mutation in Arabidopsis. Overexpression of the two poplar genes in the parvus mutant rescued most of the defects caused by the parvus mutation, including morphological changes, collapsed xylem, and altered cell wall monosaccharide composition. Quantitative RT-PCR showed that PdGATL1.1 is expressed most strongly in developing xylem of poplar. In contrast, PdGATL1.2 is expressed much more uniformly in leaf, shoot tip, cortex, phloem, and xylem, and the transcript level of PdGATL1.2 is much lower than that of PdGATL1.1 in all tissues examined. Sub-cellular localization experiments showed that these two proteins are localized to both ER and Golgi in comparison with marker proteins resident to these sub-cellular compartments. Our data indicate that PdGATL1.1 and PdGATL1.2 are functional orthologs of PARVUS/GATL1 and can play a role in xylan synthesis, but may also have role(s) in the synthesis of other wall polymers.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kong</LastName><ForeName>Yingzhen</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Complex Carbohydrate Research Center, The University of Georgia, 315 Riverbend Road, Athens, GA 30602, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhou</LastName><ForeName>Gongke</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Avci</LastName><ForeName>Utku</ForeName><Initials>U</Initials></Author><Author ValidYN="Y"><LastName>Gu</LastName><ForeName>Xiaogang</ForeName><Initials>X</Initials></Author><Author ValidYN="Y"><LastName>Jones</LastName><ForeName>Chelsea</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Yin</LastName><ForeName>Yanbin</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>Ying</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Hahn</LastName><ForeName>Michael G</ForeName><Initials>MG</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>GQ464114</AccessionNumber><AccessionNumber>GQ464115</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2009</Year><Month>08</Month><Day>24</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mol Plant</MedlineTA><NlmUniqueID>101465514</NlmUniqueID><ISSNLinking>1674-2052</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D029681">Arabidopsis Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C510128">GAT1 protein, Arabidopsis</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D026901">Membrane Transport Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C036483">T-DNA</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014990">Xylans</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.4.-</RegistryNumber><NameOfSubstance UI="C496965">GLZ1 protein, Arabidopsis</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.4.-</RegistryNumber><NameOfSubstance UI="D016695">Glycosyltransferases</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D029681" MajorTopicYN="N">Arabidopsis Proteins</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="Y">chemistry</QualifierName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005816" MajorTopicYN="N">Genetic Complementation Test</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016695" MajorTopicYN="N">Glycosyltransferases</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="Y">chemistry</QualifierName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D026901" MajorTopicYN="N">Membrane Transport Proteins</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="Y">chemistry</QualifierName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D030821" MajorTopicYN="N">Plants, Genetically Modified</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="N">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D016133" MajorTopicYN="N">Polymerase Chain Reaction</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017386" MajorTopicYN="N">Sequence Homology, Amino Acid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014990" MajorTopicYN="N">Xylans</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2009</Year><Month>10</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2009</Year><Month>10</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2010</Year><Month>2</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">19825678</ArticleId><ArticleId IdType="pii">S1674-2052(14)60717-6</ArticleId><ArticleId IdType="doi">10.1093/mp/ssp068</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Géorgie (États-Unis)</li></region></list><tree><noCountry><name sortKey="Avci, Utku" sort="Avci, Utku" uniqKey="Avci U" first="Utku" last="Avci">Utku Avci</name><name sortKey="Gu, Xiaogang" sort="Gu, Xiaogang" uniqKey="Gu X" first="Xiaogang" last="Gu">Xiaogang Gu</name><name sortKey="Hahn, Michael G" sort="Hahn, Michael G" uniqKey="Hahn M" first="Michael G" last="Hahn">Michael G. Hahn</name><name sortKey="Jones, Chelsea" sort="Jones, Chelsea" uniqKey="Jones C" first="Chelsea" last="Jones">Chelsea Jones</name><name sortKey="Xu, Ying" sort="Xu, Ying" uniqKey="Xu Y" first="Ying" last="Xu">Ying Xu</name><name sortKey="Yin, Yanbin" sort="Yin, Yanbin" uniqKey="Yin Y" first="Yanbin" last="Yin">Yanbin Yin</name><name sortKey="Zhou, Gongke" sort="Zhou, Gongke" uniqKey="Zhou G" first="Gongke" last="Zhou">Gongke Zhou</name></noCountry><country name="États-Unis"><region name="Géorgie (États-Unis)"><name sortKey="Kong, Yingzhen" sort="Kong, Yingzhen" uniqKey="Kong Y" first="Yingzhen" last="Kong">Yingzhen Kong</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= Two poplar glycosyltransferase genes, PdGATL1.1 and PdGATL1.2, are functional orthologs to PARVUS/AtGATL1 in Arabidopsis.
}}
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